Projects per year
The mechanism of hen egg white lysozyme (HEWL) adsorption on a negatively charged, hydrophilic surface has been studied using atomistic molecular dynamics (MD) simulation. Sixteen 90 ns trajectories provide adequate data to allow a detailed description of the adsorption process to be formulated. Two distinct adsorption sites have been identified. The main one is located on the N,C-terminal protein face and comprises Arg128 (the crucial one), supplemented by Arg125, Arg5, and Lys1; the minor one is used accidentally and contains only Arg68. Adsorption of this protein is driven by electrostatics, where the orientation of the protein dipole moment defines the direction of protein movement. The diffusion range on the surface depends on protein side-chain penetration through the surface water layers. This is facilitated by the long-range electric field of the charged surface, which can align polar side chains to be perpendicular to the surface. A simulation of adsorption onto a neutral ionic surface shows no such surface water layer penetration. Therefore, protein flexibility is seen to be an important factor, and to adsorb the HEWL has to adjust its structure. Nevertheless, at a flat surface only a slight loss of alpha-helical content is required. The adsorbed HEWL molecule is oriented between side-on and end-on ways, where the angle between the protein long axis (which mostly approximates the dipole moment) and the surface varies between 45 degrees and 90 degrees. Simulations with targeted mutations confirm the picture that emerges from these studies. The active site is located on the opposite face to the main adsorption site; hence, the activity of the immobilized HEWL should not be affected by the surface interactions. Our results provide a detailed insight into the adsorption mechanism and protein mobility at the surface. This knowledge will aid the proper interpretation of experimental results and the design of new experiments and functional systems.
- atomic force microscopy
- silica-water interface
- protein adsorption
- conformational changes
- binding orientation
- molecular dynamics
- neutron reflection
- albumin adsorption
FingerprintDive into the research topics of 'Mechanism of hen egg white lysozyme adsorption on a charged solid surface'. Together they form a unique fingerprint.
- 1 Finished
- 1 Participation in workshop, seminar, course
CECAM Workshop "Simulation of biomolecular interactions with inorganic and organic surfaces as a challenge for future nanotechnologies"
Paul Mulheran (Invited speaker)24 Mar 2014 → 26 Mar 2014
Activity: Participating in or organising an event types › Participation in workshop, seminar, course